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Undergraduate Research Publications, Yale College Class of 2004

For selected recent publications, please see Undergraduate Research Publications Home Page

Publications by other Yale College classes: Class of '05, Class of '06, Class of '07, Class of '08, Classes of '09-11

Doris Wang '04 analyzes the electrophysiological response of neuronal progenitor cells. Doris and advisor Angelique Bordey of Neurosurgery co-authored four papers based on Doris's work (see below), including the August 2003 cover story in Journal of Physiology.

Badr Albanna '04, Mathematics and Physics, with advisor Cornelius Beausang of Physics.

Krucken, Albanna, Bialik, Casten, Cooper, Dewald, Zamfir, Barton, Beausang, Caprio, Hecht, Klug, Novak, Pietralla and von Brentano (2002) B(E2) values in Nd-150 and the critical point symmetry X(5). Physical Review Letters 8823: 2501.

Berant, Wolf, Zamfir, Caprio, Brenner, Pietralla, Gill, Casten, Beausang, Krucken, Barton, Cooper, Hecht, Johnson, Novak, Cheng, Albanna and Gurdal (2004) g factor of the 2(1)(+) state of Yb-164. Physical Review C-Nuclear Physics. 6903: 4320.

Danielle Baek '04, Molecular, Cellular and Developmental Biology, with advisor Matthew State of Child Study Center.

	Abelson, Kwan, O'Roak, Baek, Stillman, Morgan, Mathews, Pauls, Rasin, Gunel, Davis, Ercan-Sencicek, Guez, Spertus, Leckman, Dure, Kurlan, Singer, Gilbert, Farhi, Louvi, Lifton, Sestan and State (2005) Sequence variants in SLITRK1 are associated with Tourette's syndrome. Science 310: 317-320.

Cristian Boboila '04, Molecular, Cellular and Developmental Biology, with advisor David Schatz of Immunobiology.

	Repasky, Corbett, Boboila and Schatz (2004) Mutational analysis of terminal deoxynucleotidyltransferase- mediated N-nucleotide addition in V(D)J recombination. Journal of Immunology 172: 5478-88.

Serena Chan '04, Molecular, Cellular and Developmental Biology, with advisor Gil Mor of Obstretrics and Gynecology.

	Kelly, Alvero, Chen, Silasi, Abrahams, Chan, Visintin, Rutherford and Mor (2006) TLR-4 signaling promotes tumor growth and paclitaxel chemoresistance in ovarian cancer. Cancer Research 66: 3859-3868.

Khary Carew '04, Molecular, Cellular and Developmental Biology, with advisor Richard Lifton of Genetics.

	Mani, Radhakrishnan, Farhi, Carew, Warnes, Nelson-Williams, Day, Pober, State and Lifton (2005) Syndromic patent ductus arteriosus: Evidence for haploinsufficient TFAP2B mutations and identification of a linked sleep disorder. Proceedings of the National Academy of Sciences of the United States of America 102: 2975-2979.

Yetunde Fatunmbi '04, History of Science/History of Medicine, with advisor Sarah Rockwell of Therapeutic Radiology.

	Donnelly, Liu, Fatunmbi, Lee, Magda and Rockwell (2004) Effects of texaphyrins on the oxygenation of EMT6 mouse mammary tumors. International Journal of Radiation Oncology, Biology, Physics 58: 1570-1576.

Alec Flyer '04, Molecular Biophysics and Biochemistry, with advisor Glenn Micalizio of Chemistry.

	Bahadoor, Flyer and Micalizio (2005) A pentenyl dianion-based strategy for convergent synthesis of ene-1,5-diols. Journal of the American Chemical Society 127: 3694-3695.

Courtney Glavis-Bloom '04, Cognitive Science, with advisor Amy Arnsten of Neurobiology.

	Shansky, Glavis-Bloom, Lerman, McRae, Benson, Miller, Cosand, Horvath and Arnsten (2004) Estrogen mediates sex differences in stress-induced prefrontal cortex dysfunction. Molecular Psychiatry 9: 531-538.

Matthew Greenblatt '04, Molecular Biophysics and Biochemistry, with advisor Sankar Ghosh of Immunobiology.

	Zhang, Zhang, Hayden, Greenblatt, Bussey, Flavell and Ghosh (2004) A toll-like receptor that prevents infection by uropathogenic bacteria. Science 303: 1522-1526.

Kathryn Henderson '04, Geology and Geophysics, with advisor Robert Gordon of Geology and Geophysics.

	Johnson, Jirikowic, Bertram, Van Beers, Gordon, Henderson, Klee, Lanzano, Lifset, Oetjen and Graedel (2005) Contemporary anthropogenic silver cycle: A multilevel analysis. Environmental Science & Technology 39: 4655-4665.

Jason Hong '04, Chemistry, with advisor Andrew Hamilton of Chemistry.

Baldini, Wilson, Hong and Hamilton (2004) Pattern-based detection of different proteins using an array of fluorescent protein surface receptors. Journal of the American Chemical Society 126: 5656-5657.

Zhou, Baldini, Hong, Wilson and Hamilton (2006) Pattern recognition of proteins based on an array of functionalized porphyrins. Journal of the American Chemical Society 128: 2421-2425.

Dina Ismail '04, Molecular, Cellular and Developmental Biology, with advisor Hal Blumenfeld of Neurology.

	Blumenfeld, Rivera, Vasquez, Shah, Ismail, Enev and Zaveri (2007) Neocortical and thalamic spread of amygdala kindled seizures. Epilepsia 48: 254-262.

Kimberly Idoko '04, Molecular, Cellular and Developmental Biology, with advisor Jon Reuter of Comparative Medicine.

	Reuter, Wilson, Idoko and van den Pol (2005) CD4(+) T-cell reconstitution reduces cytomegalovirus in the immunocompromised brain. Journal of Virology 79: 9527-9539.

David Johnson '04, Physics, with advisor Cornelius Beausang of Physics.

	Berant, Wolf, Zamfir, Caprio, Brenner, Pietralla, Gill, Casten, Beausang, Krucken, Barton, Cooper, Hecht, Johnson, Novak, Cheng, Albanna and Gurdal (2004) g factor of the 2(1)(+) state of Yb-164. Physical Review C-Nuclear Physics. 6903: 4320.

Meghan Kruse '04, Molecular, Cellular and Developmental Biology, and Janet Lee '06, Molecular Biophysics and Biochemistry, with advisor Joseph Madri of Pathology.

	Esparza, Kruse, Lee, Michaud and Madri (2004) MMP-2 null mice exhibit an early onset and severe experimental autoimmune encephalomyelitis due to an increase in MMP-9 expression and activity. FASEB Journal 18: 1682-1691.

Michael Mohan '04, Molecular, Cellular and Developmental Biology, with advisor David Austin of Chemistry.

	Videlock, Chung, Mohan, Strok and Austin (2004) Two-dimensional diversity: Screening human cDNA phage display libraries with a random diversity probe for the display cloning of phosphotyrosine binding domains. Journal of the American Chemical Society 126: 3730-3731.

Katie Pricola '04, Political Science, with advisor Murat Gunel of Neurosurgery.

Guclu, Ozturk, Pricola, Bilguvar, Shin, O'Roak and Gunel (2005) Mutations in apoptosis-related gene, PDCD10, cause cerebral cavernous malformation 3. Neurosurgery 57: 1008-1012.

Guclu, Ozturk, Pricola, Seker, Ozek and Gunel (2005) Cerebral venous malformations have distinct genetic origin from cerebral cavernous malformations. Stroke 36: 2479-2480.

Santiago Rompani '04, Molecular, Cellular and Developmental Biology, with advisor Weimin Zhong of Molecular, Cellular and Developmental Biology.

Tang, Rompani, Atkins, Zhou, Osterwalder and Zhong (2005) Numb proteins specify asymmetric cell fates via an endocytosis- and proteasome-independent pathway. Molecular & Cellular Biology 25: 2899-2909.

Zhou, Atkins, Rompani, Bancescu, Petersen, Tang, Zou, Stewart and Zhong (2007) The mammalian Golgi regulates numb signaling in asymmetric cell division by releasing ACBD3 during mitosis. Cell 129: 163-78.

Srinivas Viswanathan '04, Molecular Biophysics and Biochemistry, with advisor George Miller of Pediatrics (Infectious Diseases).

	Dela Cruz, Lee, Viswanathan, El-Guindy , Gerlach, Nikiforow, Shedd, Gradoville and Miller (2004) N-linked glycosylation is required for optimal function of Kaposi's sarcoma herpesvirus-encoded, but not cellular, interleukin 6. Journal of Experimental Medicine 199: 503-514.

Jennifer Voorhees '04, History of Science/History of Medicine, with advisor Murat Gunel of Neurosurgery.

Gunel, Laurans, Shin, DiLuna, Voorhees, Choate, Nelson-Williams and Lifton (2002) KRIT1, a gene mutated in cerebral cavernous malformation, encodes a microtubule-associated protein. Proceedings of the National Academy of Sciences USA 99: 10677-10682.

Laurans, DiLuna, Shin, Niazi, Voorhees, Nelson-Williams, Johnson, Siegel, Steinberg, Berg, Scott, Tedeschi, Enevoldson, Anson, Rouleau, Ogilvy, Awad, Lifton and Gunel (2003) Mutational analysis of 206 families with cavernous malformations. Journal of Neurosurgery 99: 38-43.

Guzeloglu-Kayisli, Kayisli, Amankulor, Voorhees, Gokce, DiLuna, Laurans, Luleci, Gunel (2004) Krev1 interaction trapped-1/cerebral cavernous malformation-1 protein expression during early angiogenesis. Journal of Neurosurgery. 100(Suppl): 481-487.

Guzeloglu-Kayisli, Amankulor, Voorhees, Luleci, Lifton and Gunel (2004) KRIT1/cerebral cavernous malformation 1 protein localizes to vascular endothelium, astrocytes and pyramidal cells of the adult human cerebral cortex. Neurosurgery 54: 943-949.

Doris Wang '04, Molecular, Cellular and Developmental Biology, with advisor Angelique Bordey of Neurosurgery.

Barakat, Wang and Bordey (2002) Carrier-mediated uptake and release of taurine from Bergmann glia in rat cerebellar slices. Journal of Physiology 541: 753-767.

Wang, Krueger and Bordey (2003) GABA depolarizes neuronal progenitors of the postnatal subventricular zone via GABA-A receptor activation. Journal of Physiology 550: 785-800.

Wang, Krueger and Bordey (2003) Biophysical properties and ionic signature of neuronal progenitors of the postnatal subventricular zone in situ. Journal of Neurophysiology 90: 2291-2302.

Huang, Barakat, Wang and Bordey (2004) Bergmann glial GlyT1 mediates glycine uptake and release in mouse cerebellar slices. Journal of Physiology 560: 721-736.

Stephen Waterford '04, Molecular Biophysics and Biochemistry, with advisor Frederic Gorelick of Internal Medicine.

	Waterford, Kolodecik, Thrower and Gorelick (2005) Vacuolar ATPase regulates zymogen activation in pancreatic acini. Journal of Biological Chemistry 280: 5430-5434.

David Wei '04, Molecular Biophysics and Biochemistry, with advisor Dieter Soll of Molecular Biophysics and Biochemistry.

Rosas-Sandoval, Ambrogelly, Rinehart, Wei, Cruz-Vera, Graham, Stetter, Guarneros and Soll (2002) Orthologs of a novel archaeal and of the bacterial peptidyl-tRNA hydrolase are nonessential in yeast. Proceedings of the National Academy of Sciences USA 99: 16707-16712.

Rinehart, Horn, Wei, Soll and Schneider (2004) Non-canonical eukaryotic glutaminyl- and glutamyl-tRNA synthetases form mitochondrial aminoacyl-tRNA in Trypanosoma brucei. Journal of Biological Chemistry 279: 1161-1166.

Anthony Wong '04, Molecular Biophysics and Biochemistry, with advisor Joan Steitz of Molecular Biophysics and Biochemistry.

	Scamborova, Wong and Steitz (2004) An intronic enhancer regulates splicing of the twintron of Drosophila melanogaster prospero pre-mRNA by two different spliceosomes. Molecular & Cellular Biology 24: 1855-1869.

Brian Zeglis '04, Chemistry, with advisor Robert Crabtree of Chemistry.

Chianese, Kovacevic, Zeglis, Faller and Crabtree (2004) Abnormal C5-bound N-heterocyclic carbenes: Extremely strong electron donor ligands and their iridium(I) and iridium(III) complexes. Organometallics 23: 2461-2468.

Chianese, Zeglis and Crabtree (2004) Unexpected oxidative C-C cleavage in the metallation of 2-substituted imidazolium salts to give N-heterocyclic carbene complexes. Chemical Communications 19: 2176-2177.

modified 8/11/07