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Publications: PubMed search

    2012

  1. Yang, H.*, Ji, X.*, Zhao, G., Ning, J., Zhao, Q., Aiken, C., Gronenborn, A.M., Zhang, P. & Xiong, Y. (2012). Structural Insight into HIV-1 Capsid Recognition by Rhesus TRIM5α. Proc. Natl. Acad. Sci. USA. 109,18372-18377. (*: equal contributions)

  2. Jia, X., Sing, R., Homann, S., Yang, H., Guatelli, J. & Xiong, Y. (2012). Structural Basis of Evasion of Cellular Adaptive Immunity by HIV-1 Nef. Nat. Struct. Mol. Biol. 19, 701-706.

  3. Zheng, A., Du, J., Xiong, Y. & Yu, X.F. (2012). Reduced APOBEC3H variant anti-viral activities are associated with altered RNA binding activities. Plos One 7 (7): e38771.

    2011

  4. Kim, J., Roberts, A., Yuan, H., Xiong, Y. & Anderson, K.S. (2012). Nucleocapsid Protein Annealing of a Primer-Template Enhances (+)-Strand DNA Synthesis and Fidelity by HIV-1 Reverse Transcriptase. J. Mol. Biol. 415, 866-80. Epub 2011 Dec 23.

  5. Burton, J.L., Xiong, Y. & Solomon, M.J. (2011). Mechanisms of Pseudosubstrate Inhibition of the Anaphase Promoting Complex by Acm1. EMBO J. 30, 1818-1829

  6. Butler, E., Xiong, Y., Wang, J. & Strobel, A.S. (2011). Structural Basis of Cooperative Ligand Binding by the Glycine Riboswitch. Chem. Biol. 18, 293-298.

    2010

  7. Pan, B., Xiong Y. & Steitz. T.A. (2010). How CCA-Adding Enzyme Selects Adenine over Cytosine at Position 76 of tRNA. Science 330, 937-940.

  8. Yang, H.*, Wang, J.*, Jia, X., Zang, T., McNatt, M.W., Pan. B., Meng W., Wang, H., Bieniasz, P.D. & Xiong, Y. (2010). Structural Insight into the Mechanisms of Enveloped Viruses Tethering by Tetherin/BST2. Proc. Natl. Acad. Sci. USA. 107, 18428-18432. (*: equal contributions)

  9. Zhang, W., Du, J., Yu, K., Wang, T., Xiong, Y. & Yu, X.F. (2010). Association of potent human anti-viral cytidine deaminases with 7SL RNA and viral RNP in HIV-1 Virions. J Virol. 84, 12903-12913.

  10. Wolfe, L.S.*, Calabrese, M.F.*, Nath, A.*, Blaho, D.V., Miranker, A.D.# & Xiong, Y.# (2010). Protein-induced photophysical changes to the amyloidindicator dye, thioflavin T. Proc. Natl. Acad. Sci. USA. 107, 16863-16868. (*: equal contributions; #: corresponding authors) [pdf]

  11. Wolfe, L.S.*, Stanley, B.J.*, Liu, C., Eliason, W.K., & Xiong, Y. (2010). Dissection of HIV Vif interaction with the human E3 ubiquitin ligase. J Virol. 84, 7135-7139. (*: equal contributions) [pdf]

  12. Singh, T.S., Saro, D., Ali, A.M., Zheng, X., Du. C., Killen, M.W., Wahengbam, K., Pierce, A.J., Sachpatzidis, A., Xiong, Y., Sung, P. & Meetei, A.R. (2010). MHF1-MHF2, a Histone-Fold-Containing Protein Complex, Participates in the Fanconi Anemia Pathway via FANCM. Mol. Cell 37, 879-86. [pdf]

  13. Zhen, A., Wang, T., Zhao, K., Xiong, Y. & Yu, X.F. (2010). A single amino acid difference in human APOBEC3H variants determines HIV-1 Vif sensitivity. J Virol. 80, 1902-1911. Epub 2009 Nov 25. [pdf]

    14. 2009

  14. Murphy, J.W., Yuan, H., Kong, Y., Xiong, Y. & Lolis, E.J. (2009). Heterologous quaternary structure of CXCL12 and its relationship to the CC chemokine family. Proteins 78, 1331-1337. [pdf]

  15. Fang, Y., Jayaram, H., Shane, T., Kolmakova-Partensky, L., Wu, F., Williams, C., Xiong. Y. & Miller. C. (2009). Structure of a Prokaryotic Virtual Proton Pump at 3.2 Å Resolution. Nature 460, 1040-1043. [pdf]

  16. Randau, L*#, Stanley, B*, Kohlway, A., Mechta, S., Xiong, Y.# & Soll, D.# (2009). A cytidine deaminase edits tRNAs in archaeal. Science 324, 657-659. (*: equal contributions; #: corresponding authors) [pdf]

    17. 2008

  17. Stanley, B.J., Ehrlich, E.S., Short, L., Yu, Y., Xiao, Z., Yu, XF & Xiong, Y. (2008). Structural Insight into the HIV Vif SOCS Box and Its Role in Human E3 Ubiquitin Ligase Assembly. J Virol. 82, 8656-63. [pdf]

  18. Xiong, Y. (2008). From electron microscopy to X-ray crystallography: molecular replacement case studies. Acta Cryst. D64, 76-82. [pdf]

    19. 2007

  19. Lomakin, I.B.*, Xiong, Y.*# & Steitz, T.A.# (2007). The crystal structure of yeast fatty acid synthase, a cellular machine with eight active sites working together. Cell 129, 319-332. (*: equal contributions; #: corresponding authors) [pdf]

    20. Pre-2007

  20. Xiong, Y. & Steitz, T.A. (2006). A story with a good ending: tRNA 3'-end maturation by CCA-adding enzymes. Curr Opin Struct Biol. 16, 12-17. [pdf]

  21. Li, W., Kamtekar, S., Xiong, Y. , Grindley, N.D. & Steitz, T.A. (2005). Structure of a synaptic resolvase tetramer covalently linked to two cleaved DNAs. Science 309, 1210-1215. [pdf]

  22. Xiong, Y. & Steitz, T.A. (2004). Mechanism of transfer RNA maturation by CCA-adding enzyme without using an oligonucleotide template. Nature 430, 640-645. [pdf]

  23. Xiong, Y. , Li, F., Wang, J., Weiner A.M. & Steitz, T.A. (2003). Crystal Structures of an Archaeal Class I CCA-Adding Enzyme and Its Nucleotide Complexes. Molecular Cell 12, 1165-1172. [pdf]

  24. Pan, B., Xiong, Y. , Shi, K. & Sundaralingam, M. (2003). Crystal structure of a bulged RNA tetraplex at 1.1 Å resolution: Implications for a novel binding site in RNA tetraplexe. Structure 11, 1423-1430. [pdf]

  25. Pan, B., Xiong, Y. , Shi, K. Deng, J. & Sundaralingam, M. (2003). Crystal structure of an RNA purine-rich tetraplex containing adenine tetrads: Implications for specific binding in RNA tetraplexes. Structure 11, 815-823. [pdf]

  26. Pan, B., Xiong, Y. , Shi, K. & Sundaralingam, M. (2003). An eight-stranded helical fragment in RNA crystal structure: Implications for tetraplex interaction. Structure 11, 825-831. [pdf]

  27. Deng, J., Xiong, Y. , Pan, B. & Sundaralingam, M. (2003). Structure of an RNA dodecamer containing a fragment from SRP domain IV of E. coli. Acta Cryst. D59, 1004-1011. [pdf]

  28. Main, E., Xiong, Y. , Cocco, M., D'andrea, L. & Regan, L. (2003). Design of Stable a Helical Arrays from an Idealized TPR Motif. Structure 11, 497-508. [pdf]

  29. Li, F., Xiong, Y. , Wang, J., Cho, H., Tomita, K., Weiner, A.M. & Steitz, T.A. (2002). Crystal structures of Bacillus Stearothermophilus CCA-adding enzyme and its complexes with ATP or CTP. Cell 111, 814-824. [pdf]

  30. Smansy, S.M., Xiong, Y. , Hemann C., Hille R., Sundaralingam, M. & Cowan, J. (2002). Crystal Structure and Stability Studies of C77S HiPIP: A Serine Ligated [4Fe-4S] Cluster. Biochemistry 41, 1195-1201. [pdf]

  31. Deng, J.*, Xiong, Y.* & Sundaralingam, M. (2001). X-ray analysis of an RNA tetraplex (UGGGGU)4 with divalent Sr2+ ions at subatomic resolution (0.61 Å). Proc. Natl. Acad. Sci. USA. 98,13665-13670. (*: equal contributions) [pdf]

  32. Xiong, Y. , Deng, J., Sudarsanakumar, C. & Sundaralingam, M. (2001). Crystal Structure of an RNA Duplex r(gugucgcac) with Uridine Bulges. J. Mol. Biol. 313, 573-82. [pdf]

  33. Deng, J., Xiong, Y. , Sudarsanakumar, C., Shi, K. & Sundaralingam, M. (2001). Crystal structures of two forms of a 14-mer RNA/DNA chimer duplex with double UU bulges: a novel intramolecular U*(A-U) base triple. RNA 7, 1425-31. [pdf]

  34. Xiong, Y. & Sundaralingam, M. (2001). Protein-nucleic acid interaction: major groove recognition determinants. In Encyclopedia of Life Sciences (Macmlllan Reference Ltd, London). [pdf]

  35. Xiong, Y. & Sundaralingam, M. (2000). Two Crystal Forms of helix II of the X. Laevis 5S rRNA with a cytosine bulge. RNA 6, 1316-1324. [pdf]

  36. Xiong, Y. & Sundaralingam, M. (2000). Crystal structure of a DNA-RNA hybrid duplex with a polypurine RNA r(gaagaagag) and a complementary poly pyrimidine DNA d(CTCTTCTTC). Nucleic Acids Res. 28, 2171-2176. [pdf]

  37. Sudarsanakumar, C., Xiong, Y. & Sundaralingam, M. (2000). Crystal structure of an adenine bulge in the RNA chain of a DNA-RNA hybrid, d(TTCCTCTTC)-(gaagagagag). J. Mol. Biol. 299, 103-112. [pdf]

  38. Xiong, Y. & Sundaralingam, M. (1998). Crystal structure and conformation of a DNA·RNA hybrid duplex with a polypurine RNA strand: d(TTCTTBr5CTTC)-(gaagaagaa). Structure 6, 1493-1501. [pdf]

last modified:2010-06-29