Gene Transfer Agents
Bacteria can experience genetic exchange (sex) through the process
of transduction, where DNA is transferred between cells via infectious
bacteriophages. But transduction seems rare in natural populations of
bacteria, because it is an inadvertent mistake of ordinary phage infection.
In contrast, the gene transfer agent (GTA) of Rhodobacter capsulatus
is a phage-like element that resides in the bacterial chromosome, and
packages and shuttles random pieces of genomic DNA between cells. Because
GTA particles appear unable to induce normal phage infection, it has
been proposed that GTA is a defective phage co-opted by R. capsulatus
to promote gene exchange.
Our current work examines the prevalence and expression of GTA-like
elements in the alpha-proteobacteria, especially in the aquatic
bacterium Caulobacter crescentus. We use comparative genomics to
identify candidate GTA elements in sequenced bacterial genomes,
and employ molecular genetics to verify the activity of these GTA-like
elements.
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