Jacobs-Wagner Lab

Research
Cell cycle regulation and cellular differentiation.
Our research program addresses the principles that govern temporally and spatially controlled-dynamics of protein localization, and the mechanisms that underlie cell cycle control and the acquisition and propagation of asymmetry. To do this, we use a simple prokaryotic model system, Caulobacter crescentus, whose life cycle depends on obligate steps of cell differentiation and asymmetric cell division. This simple bacterial system provides sophisticated genetics and biochemistry, ease of obtaining synchronized cell cycle cultures, new cytology tools to study protein dynamics in live cells, and post-genomic DNA microarray techniques that can systematically monitor the expression of the 3,700 C. crescentus genes.

Each cell division in C. crescentus is asymmetric and gives rise to a swarmer (SW) progeny and a stalked (ST) progeny (Fig. 1). The motile but replication inert swarmer cell (SW) has first to differentiate into a non-motile stalked cell  (ST)   before  it  can  initiate  DNA  replication.  During  the swarmer-to-stalked (G1-S) cell transition, the flagellum and pili are replaced by a polar stalk. The stalked cell elongates into a predivisional cell which builds a new flagellum at the pole opposite the stalk. Each morphogenetic event during the cell cycle relies on the completion of a specific step of the cell cycle. Several two-component signal transduction proteins are involved in controlling differentiation and cell cycle progression in this organism. We and others discovered that several essential signal transduction proteins change their subcellular location in a cell cycle-dependent fashion (movies), adding an unexpected layer of spatial regulation. We have recently shown that asymmetric spatial distribution of cell cycle regulators is not limited to intrinsically polarized bacteria but is also employed by bacteria with no apparent asymmetry or polarity (movie 3). This suggests that protein localization may provide a general mechanism of prokaryotic regulation to control signal transduction. Using a combination of genetic, biochemistry, and innovative cell imaging approaches, we are investigating the significance and the temporal and spatial mechanisms of protein localization in bacteria.

Cell shape and the bacterial cytoskeleton.

The eukaryotic cytoskeleton, which consists of microtubules, actin microfilaments and intermediate filaments, plays a major role in maintaining the various cell shapes of higher organisms. The prokaryotic world is also rich in cell shapes whose conservation for a given species highlights its importance for fitness. Yet, little is known about how bacteria achieve their diverse, often asymmetric cell shapes. In most bacteria, cell shape maintenance requires the integrityof the exocellular cell wall. It was recently discovered that bacteria possess functional and structural homologs of actin (MreB and relatives) that support the shape by forming helical, actin-like cables that encircle the cell beneath the cytoplasmic membrane. This actin-like cytoskeleton plays a major role in determining the rod shape of Escherichia coli, Bacillus subtilis, C. crescentus, and presumably all non- spherical bacteria. Lately, we have discovered that, in addition to previously characterized actin-like and tubulin-like proteins (the cell division protein, FtsZ, being the bacterial counterpart of tubulin), bacteria can also possess an intermediate filament-like cytoskeleton.

We have shown that an intermediate filament-like protein, crescentin (encoded by creS) is essential for the vibroid (curved rod) and helical shapes of C. crescentus. In its absence, the cells adopt a straight-rod morphology (Fig. 2). Crescentin and animal intermediate filament proteins share many characteristic features, including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms filamentous structures that colocalize with the inner cell curvatures (Fig. 3), suggesting that the laterally asymmetric localization of crescentin causes cell curvature. Using cell imaging techniques, genetics, and biochemistry, we are now 1) investigating the mechanism by which crescentin filaments cause cell curvature, 2) characterizing the assembly properties of crescentin filaments, in comparison with those of animal intermediate filaments, 3) identifying other cytoskeletal and cytoskeleton-associated factors involved in bacterial cell shape.